BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003E06SP1|AL425134
(1006 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1249 1948 0.0
>3x_Contig1249
Length = 5939
Score = 1948 bits (980), Expect = 0.0
Identities = 997/1002 (99%), Gaps = 2/1002 (0%)
Strand = Plus / Minus
Query: 1 agacatgaagtagtttataacttatctatttcgtgaatccaatatcgtgcttgtatgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 agacatgaagtagtttataacttatctatttcgtgaatccaatatcgtgcttgtatgttt 1682
Query: 61 ttctaatttgaaaacggattttgatctcatctctcaaggtcacaatagtccactcaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 ttctaatttgaaaacggattttgatctcatctctcaaggtcacaatagtccactcaagga 1622
Query: 121 caataaatcgagggaaactgccaatggattcaaatgaaatttctgacaaccggtattgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 caataaatcgagggaaactgccaatggattcaaatgaaatttctgacaaccggtattgtt 1562
Query: 181 gtcaccccgccgaagttttaaatatggataccgagaagaaagttagcacaccatctgtcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gtcaccccgccgaagttttaaatatggataccgagaagaaagttagcacaccatctgtcg 1502
Query: 241 aattgaacgagatgaaaagacagatgttagttcagaagaaagagatacaaagattaaagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 aattgaacgagatgaaaagacagatgttagttcagaagaaagagatacaaagattaaagc 1442
Query: 301 aggttcaacattttatggagctacaaagaaacactactagatagataccaagagttgctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 aggttcaacattttatggagctacaaagaaacactactagatagataccaagagttgctc 1382
Query: 361 tgccgatattctcagattaccatcgaatttgaccatgcgtasc-acatcttagctaattt 419
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 1381 tgccgatattctcagattaccatcgaatttgaccatgcgtagccacatcttagctaattt 1322
Query: 420 tgggttgtccgttatgagaggcatccatttgtacacttgaatcagttgttcgtcaattgg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tgggttgtccgttatgagaggcatccatttgtacacttgaatcagttgttcgtcaattgg 1262
Query: 480 tctcctatgcvagavattatcgcttgaaacattcccgaacatcccattgaatgattcatt 539
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 tctcctatgcaagaaattatcgcttgaaacattcccgaacatcccattgaatgattcatt 1202
Query: 540 tttagtcacctgaggccaatcctcgttactgggtttcccaaacttatcaaataaagtgag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 tttagtcacctgaggccaatcctcgttactgggtttcccaaacttatcaaataaagtgag 1142
Query: 600 cacaagttttatgtcagaacattcgtcgaaatcaatgtctatcactttgctgctttttga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 cacaagttttatgtcagaacattcgtcgaaatcaatgtctatcactttgctgctttttga 1082
Query: 660 tttggattgtgttttatcgttccagagttgagaaatcaacacagctaatgcccaaatatc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tttggattgtgttttatcgttccagagttgagaaatcaacacagctaatgcccaaatatc 1022
Query: 720 tatctcgaatttgtaatttgacacgctaaagagaagctctggtgctttgtaaattgatgt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tatctcgaatttgtaatttgacacgctaaagagaagctctggtgctttgtaaattgatgt 962
Query: 780 ggaacaatcacaggtcttggcctcattatccagattcctattgtaacttataccgaagtc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggaacaatcacaggtcttggcctcattatccagattcctattgtaacttataccgaagtc 902
Query: 840 ccctaatacgacttcattgtacgagttaagcatgatattctgcggtttgacatccctatg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ccctaatacgacttcattgtacgagttaagcatgatattctgcggtttgacatccctatg 842
Query: 900 tataatgccattaccgtgtatataaactaatccctcgattatttgtc-tataatcactgt 958
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 841 tataatgccattaccgtgtatataaactaatccctcgattatttgtcttataatcactgt 782
Query: 959 cgagtgatcgagtggtatggtatttgaatatgtttttgtaga 1000
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cgagtgatcgagtggtatggtatttgaatatgtttttgtaga 740
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7357
Number of Sequences: 1807
Number of extensions: 7357
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 1006
length of database: 10,358,551
effective HSP length: 16
effective length of query: 990
effective length of database: 10,329,639
effective search space: 10226342610
effective search space used: 10226342610
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)